Publications | Journal Articles
Hussain, B., B. A. Akp?nar, M. Alaux, A. M. Algharib, D. Sehgal, Z. Ali, G. I. Aradottir, J. Batley, A. Bellec, A. R. Bentley, H. B. Cagirici, L. Cattivelli, F. Choulet, J. Cockram, F. Desiderio, P. Devaux, M. Dogramaci, G. Dorado, S. Dreisigacker, D. Edwards, K. El-Hassouni, K. Eversole, T. Fahima, M. Figueroa, S. Gálvez, K. S. Gill, L. Govta, A. Gul, G. Hensel, P. Hernandez, L. A. Crespo-Herrera, A. Ibrahim, B. Kilian, V. Korzun, T. Krugman, Y. Li, S. Liu, A. F. Mahmoud, A. Morgounov, T. Muslu, F. Naseer, F. Ordon, E. Paux, D. Perovic, G. V. P. Reddy, J. C. Reif, M. Reynolds, R. Roychowdhury, J. Rudd, T. Z. Sen, S. Sukumaran, B. S. Ozdemir, V. K. Tiwari, N. Ullah, T. Unver, S. Yazar, R. Appels and H. Budak (2022). "Capturing Wheat Phenotypes at the Genome Level." Frontiers in Plant Science 13. https://doi.org/10.3389/fpls.2022.851079
Zhu, Tingting; Wang, Le; Rimbert, Helene; Rodriguez, Juan; Deal, Karin; De Oliveira, Romain; Choulet, Frédéric; Keeble-Gagnere, Gabriel; Tibbits, Josquin; Rogers, Jane; Eversole, Kellye; Appels, Rudi; Gu, YongQiang; Mascher, Martin; Dvorak, Jan; Luo, Ming-Cheng (2021). "Optical maps refine the bread wheat Triticum aestivum cv Chinese Spring genome assembly." The Plant Journal 107 (1):303-314. https://doi.org/10.1111/tpj.15289
Pankaj Trivedi, Chakradhar Mattupalli, Kellye Eversole, and Jan E. Leach (2021). "Enabling sustainable agriculture through understanding and enhancement of microbiomes." Tansley Review. New Phytologist 230(6): 2129-2147. https://doi.org/10.1111/nph.17319
Ryan, M. J., M. Schloter, G. Berg, L. L. Kinkel, K. Eversole, J. A. Macklin, D. Rybakova and A. Sessitsch (2021). "Towards a unified data infrastructure to support European and global microbiome research: a call to action." Environmental Microbiology 23(1): 372-375. https://doi.org/10.1111/1462-2920.15323
McCouch, S., K. Navabi, M. Abberton, N. L. Anglin, R. L. Barbieri, M. Baum, K. Bett, H. Booker, G. L. Brown, G. J. Bryan, L. Cattivelli, D. Charest, K. Eversole, M. Freitas, K. Ghamkhar, D. Grattapaglia, R. Henry, M. C. Valadares Inglis, T. Islam, Z. Kehel, P. J. Kersey, S. Kresovich, E. Marden, S. Mayes, M. N. Ndjiondjop, H. T. Nguyen, S. Paiva, R. Papa, P. W. B. Phillips, A. Rasheed, C. Richards, M. Rouard, M. J. Amstalden Sampaio, U. Scholz, P. D. Shaw, B. Sherman, S. E. Staton, N. Stein, J. Svensson, M. Tester, J. F. Montenegro Valls, R. Varshney, S. Visscher, E. von Wettberg, R. Waugh, P. W. B. Wenzl and L. H. Rieseberg (2020). "Mobilizing Crop Biodiversity." Molecular Plant. 13(10): 1341-1344. https://doi.org/10.1016/j.molp.2020.08.011
Ryan, M. J., M. Schloter, G. Berg, T. Kostic, L. L. Kinkel, K. Eversole, J. A. Macklin, B. Schelkle, M. Kazou, I. Sarand, B. K. Singh, D. Fischer, E. Maguin, I. Ferrocino, N. Lima, R. S. McClure, T. C. Charles, R. S. C. de Souza, G. S. Kiran, H. L. Krug, J. Taffner, H. Roume, J. Selvin, D. Smith, D. Rybakova and A. Sessitsch (2020). “Development of Microbiome Biobanks — Challenges and Opportunities.” Trends in Microbiology. https://doi.org/10.1016/j.tim.2020.06.009
Berg, G., D. Rybakova, D. Fischer, T. Cernava, M.-C. C. Vergès, T. Charles, X. Chen, L. Cocolin, K. Eversole, G. H. Corral, M. Kazou, L. Kinkel, L. Lange, N. Lima, A. Loy, J. A. Macklin, E. Maguin, T. Mauchline, R. McClure, B. Mitter, M. Ryan, I. Sarand, H. Smidt, B. Schelkle, H. Roume, G. S. Kiran, J. Selvin, R. S. C. d. Souza, L. van Overbeek, B. K. Singh, M. Wagner, A. Walsh, A. Sessitsch and M. Schloter (2020). “Microbiome definition re-visited: old concepts and new challenges.” Microbiome 8(1): 103. https://doi.org/10.1186/s40168-020-00875-0
JP Dundore-Arias, Emiley A Eloe-Fadrosh, Lynn M Schriml, Gwyn A Beattie, Fiona P Brennan, Posy E Busby, Rosalie B Calderon, Sarah C Castle, Joanne B Emerson, Sydney Everhart, Kellye Eversole, Kenneth Frost, Joshua Herr, Alejandra I Huerta, Anjali S Iyer- Pascuzzi, Audrey Kalil, Jan E. Leach, Jhonson Leonard, Jude E Maul, Bharath Prithiviraj, Marta Potrykus, Neelam R Redekar, J Alejandro Rojas, Kevin A. T. Silverstein, Dan Tomso, Susannah Tringe, Boris Vinatzer, and Linda Kinkel (2020). "Community-driven Metadata Standards for Agricultural Microbiome Research." Phytobiomes Journal 2020 4:2, 115-121. https://doi.org/10.1094/PBIOMES-09-19-0051-P
Hood, E. E., K. A. Eversole, L. Leach, M. Hogan, A. McHughen, J. Cordts, K. Rathore, T. Rood, S. Collinge and M. Irey (2019). "Report on the SCRA Nuts and Bolts Workshop II: case studies of citrus greening, Ultra-low Gossypol Cotton, and blight tolerant, low- acrylamide potato." GM Crops & Food: 1-20. https://doi.org/10.1080/21645698.2019.1634989
International Wheat Genome Sequencing Consortium (IWGSC), R. Appels, K. Eversole (corresponding author), C. Feuillet, B. Keller, J. Rogers, N. Stein, C. J. Pozniak, F. Choulet, A. Distelfeld, J. Poland, G. Ronen, A. G. Sharpe, O. Barad, K. Baruch, G. Keeble-Gagnere, M. Mascher, G. Ben-Zvi, A.-A. Josselin, A. Himmelbach, F. Balfourier, J. Gutierrez-Gonzalez, M. Hayden, C. Koh, G. Muehlbauer, R. K. Pasam, E. Paux, C. J. Pozniak, P. Rigault, J. Tibbits, V. Tiwari, M. Spannagl, D. Lang, H. Gundlach, G. Haberer, K. F. X. Mayer, D. Ormanbekova, V. Prade, H. Simkova, T. Wicker, D. Swarbreck, H. Rimbert, M. Felder, N. Guilhot, G. Kaithakottil, J. Keilwagen, P. Leroy, T. Lux, S. Twardziok, L. Venturini, A. Juhasz, M. Abrouk, I. Fischer, C. Uauy, P. Borrill, R. H. Ramirez-Gonzalez, D. Arnaud, S. Chalabi, B. Chalhoub, A. Cory, R. Datla, M. W. Davey, J. Jacobs, S. J. Robinson, B. Steuernagel, F. van Ex, B. B. H. Wulff, M. Benhamed, A. Bendahmane, L. Concia, D. Latrasse, J. Bartos, A. Bellec, H. Berges, J. Dolezel, Z. Frenkel, B. Gill, A. Korol, T. Letellier, A. Olsen, K. Singh, M. Valarik, E. van der Vossen, S. Vautrin, S. Weining, T. Fahima, V. Glikson, D. Raats, J. Cihalikova, H. Toegelova, J. Vrana, P. Sourdille, B. Darrier, D. Barabaschi, L. Cattivelli, P. Hernandez, S. Galvez, H. Budak, J. D. G. Jones, K. Witek, G. Yu, I. Small, J. Melonek, R. Zhou, T. Belova, K. Kanyuka, R. King, K. Nilsen, S. Walkowiak, R. Cuthbert, R. Knox, K. Wiebe, D. Xiang, A. Rohde, T. Golds, J. Cizkova, B. A. Akpinar, S. Biyiklioglu, L. Gao, A. N’Daiye, M. Kubalakova, J. Safar, F. Alfama, A.-F. Adam-Blondon, R. Flores, C. Guerche, M. Loaec, H. Quesneville, J. Condie, J. Ens, R. Maclachlan, Y. Tan, A. Alberti, J.-M. Aury, V. Barbe, A. Couloux, C. Cruaud, K. Labadie, S. Mangenot, P. Wincker, G. Kaur, M. Luo, S. Sehgal, P. Chhuneja, O. P. Gupta, S. Jindal, P. Kaur, P. Malik, P. Sharma, B. Yadav, N. K. Singh, J. Khurana, C. Chaudhary, P. Khurana, V. Kumar, A. Mahato, S. Mathur, A. Sevanthi, N. Sharma, R. S. Tomar, K. Holusova, O. Plihal, M. D. Clark, D. Heavens, G. Kettleborough, B. Balcarkova, K. Holusova, Y. Hu, E. Salina, N. Ravin, K. Skryabin, A. Beletsky, V. Kadnikov, A. Mardanov, M. Nesterov, A. Rakitin, E. Sergeeva, H. Handa, H. Kanamori, S. Katagiri, F. Kobayashi, S. Nasuda, T. Tanaka, J. Wu, F. Cattonaro, M. Jiumeng, K. Kugler, M. Pfeifer, S. Sandve, X. Xun, B. Zhan, J. Batley, P. E. Bayer, D. Edwards, S. Hayashi, Z. Tulpova?, P. Visendi, L. Cui, X. Du, K. Feng, X. Nie, W. Tong and L. Wang (2018). Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science 361(6403). https://doi.org/10.1126/science.aar7191
Alaux, M., J. Rogers, T. Letellier, R. Flores, F. Alfama, C. Pommier, N. Mohellibi, S. Durand, E. Kimmel, C. Michotey, C. Guerche, M. Loaec, M. Laine?, D. Steinbach, F. Choulet, H. Rimbert, P. Leroy, N. Guilhot, J. Salse, C. Feuillet, E. Paux, K. Eversole, A.-F. Adam-Blondon, H. Quesneville and C. International Wheat Genome Sequencing (2018). "Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data." Genome Biology 19(1): 111.
Rimbert, H., B. Darrier, J. Navarro, J. Kitt, F. Choulet, M. Leveugle, J. Duarte, N. Rivie?re, K. Eversole, C. on behalf of The International Wheat Genome Sequencing, J. Le Gouis, C. on behalf The BreedWheat, A. Davassi, F. Balfourier, M.-C. Le Paslier, A. Berard, D. Brunel, C. Feuillet, C. Poncet, P. Sourdille and E. Paux (2018). "High throughput SNP discovery and genotyping in hexaploid wheat." PLOS ONE 13(1): e0186329.
Kevin McCluskey, Anne Alvarez, Rick Bennett, Deepak Bokati, Kyria Boundy-Mills, Daniel Brown, Carolee T. Bull, Michael Coffey, Tyler Dreaden, Clifford Duke, Greg Dye, Erin Ehmke, Kellye Eversole, Kristi Fenstermacher, David Geiser, Jessie A. Glaeser, Stephanie Greene, Lisa Gribble, M. Patrick Griffith, Kathryn Hanser, Richard Humber, Barbara W. Johnson, Anthony Kermode, Micah Krichevsky, Matt Laudon, Jan Leach, John Leslie, Meghan May, Ulrich Melcher, David Nobles, Natalia Risso Fonseca, Sara Robinson, Matthew Ryan, James Scott, Carolyn Silflow, Anne Vidaver, Kimberly M. Webb, John E. Wertz, Sara Yentsch, and Sarah Zehr (2016). "The U.S. Culture Collection Network Lays the Foundation for Progress in Preservation of Valuable Microbial Resources." Phytopathology 106, 532-540.
Pippenger, N., Segall, R.S., Berleant, D., Eversole, K.A., Mustell, R.A., Vicuna-Requesens, D., and Hood, E.E. (2015) "Extracting Numerical Information about Corn Composition from Texts." Journal of Systemics, Cybernetics and Informatics 13, 68-75.
The International Wheat Genome Sequencing Consortium (principal investigators Klaus FX Mayer, Jane Rogers, Jaroslav Doležel, Kellye Eversole, Catherine Feuillet), (2014). "A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome." Science 345(6194).
Eversole, K., C. Feuillet, K. F. X. Mayer and J. Rogers (2014). "Slicing the wheat genome." Science 345(6194): 285-287.
Keilwagen, J., B. Kilian, H. Özkan, S. Babben, D. Perovic, K. F. X. Mayer, A. Walther, C. H. Poskar, F. Ordon, K. Eversole, A. Börner, M. Ganal, H. Knüpffer, A. Graner and S. Friedel (2014). "Separating the wheat from the chaff – a strategy to utilize plant genetic resources from ex situ genebanks." Sci. Rep. 4.
Ma, J., J. Stiller, P. J. Berkman, Y. Wei, J. Rogers, C. Feuillet, J. Dolezel, K. Mayer, K. Eversole, Y.L. Zheng and C. Liu (2013). "Sequence-Based Analysis of Translocations and Inversions in Bread Wheat (Triticum aestivum L.)." PLoS ONE 8(11)
Fletcher, J., J. Leach, K. Eversole, and R. Tauxe (2013). "Human pathogens on plants: Designing a multidisciplinary strategy for research." Phytopathology 103 (4): 306-315.
Sparrow, P., I. Broer, E. Hood, K. Eversole, F. Hartung, and J. Schiemann (2013). "Risk assessment and regulation of molecular farming – a comparison between Europe and US." Current Pharmaceutical Design 19 (31): 5513-5530).
Groenen, M.A.M., …. Kellye Eversole, et al. (2012). "Analyses of pig genomes provide insight into porcine demography and evolution." Nature 491, 393-398.
Stein, L. Rossini, S. Praud, K. Mayer, A. Schulman, K. Eversole and R. Appels (2012). "Integrating cereal genomics to support innovation in the Triticeae." Functional & Integrative Genomics 12(4): 573-583.
C. Feuillet, J. E. Leach, J. Rogers, P. S. Schnable and K. Eversole (2011). "Crop genome sequencing: lessons and rationales." Trends in Plant Science 16(2): 77-88.
Feuillet, C, Eversole K (2009). "Solving the maze." Science 326: 1071-1072.
The Bovine HapMap Consortium, Gibbs R A, Taylor J F, Van Tassel, CP, Barendse, W, Eversole KA et al. (2009). "Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds." Science 324: 528-532.
Paux E, Sourdille P, Salse J, Saintenac C, Choulet F, Leroy P, Korol A, Michalak M, Kianian S, Spielmeyer W, Lagudah E, Somers D, Kilian A, Alaux M, Vautrin S, Berges H, Eversole K, Appels R, Safar J, Simkova H, Dolezel J, Bernard M, and Feuillet C. (2008). "A physical map of the 1-gigabase bread wheat chromosome 3B." Science 322: 101-104.
Feuillet C and Eversole K (2008). "Physical mapping of the wheat genome: a coordinated effort to lay the foundation for genome sequencing and develop tools for breeders." Israel Journal of Plant Sciences 55: 307-313.
Schook L, Beever J, Rogers J, Humphray S, Archibald A, Chardon P, Milan D, Rohrer G, and Eversole K (2005). "Swine Genome Sequencing Consortium (SGSC): a strategic roadmap for sequencing the pig genome." Comparative and Functional Genomics 6: 251-255.
Leach JE, Gold S, Tolin S, and Eversole K, PLANT-ASSOCIATED MICROBE GENOME INITIATIVE. 2003. White Paper Developed by the Plant Microbiology Research Community, Phytopathology 93, 524-527.